The main thing that put me off is the 2 pipes on the left hand side reducing into one, surely that cant flow smoothly through 
Dont have any experience in that so i may be completely wrong.
Erm, that is what the turbo is for!

Providing the turbo has the capacity to provide the maximum flow rate at max rpms, then that won't be an issue. Only on naturally aspirated cars would you need to be worried about such airflows.
If i had the money i would get my mate graham who owns grs mototrsport, to knock me up a custom intercooler. He is the master of intercoolers lol, he is very big on the ford rs scene ie cosworth and the new mini cooper s, the one for the mini performed much better than the forge one in back to back tests. It is also ranked as the best top mount available for the cooper s.
Snipage . . . .
Two very crucial issues. Firstly you are talking of "custom builds" - which can be very expensive compared to "off the shelf" items such as the S3 or Forge.
Secondly, the Mini has a seriously compromised engine bay, and mounting of intercoolers is seriously compromised by a complete lack of space. Top mounted intercoolers are hugely less efficient compared to an identical spec front mount intercooler. Even side mount intercoolers are better than top mounts.
Sadly, the Mini is style before substance, and suffers from too many engineering compromises.
EDIT: Oh, and GRS welding in no better than either the Forge or OEM S3 welding!
