Definitely smooth the top of the airbox as well. Where the opening that connects to the intake pipe is, round that off so it's not a sharp edge if you know what I mean. Regarding the openings, I have two on mine.

Top half with the rounded lip


Since that was taken I've pulled the smaller air feed out of the hole and aimed it in that direction rather than actually being in the airbox, and I've cut away the bit from the slam panel that obstructs the bigger hole.