It is indeed the brake master cylinder that is gone. The car went back to the garage, and by clamping the flexible sections of the brake pipes (all of them) when pressing the pedal it still crept to the floor, and while doing it a few times in the garage, the creeping got faster and faster each time, and effectively there is little pressure now applied to the brake callipers - not that the car is on the road at the moment.
Anyway the new brake cylinder is on it's way, they are hard to find so taking a few days, made worse by the fact the wrong one arrived earlier in the week.
But the mechanic opened the cylinder to have a look, and you can see there is a a section on the internal bore that is a bit worn - probably what was the usual travel stroke of the cylinder.
It looks as though when I had the brake leak, and the pedal went to the floor, that the seals inside the cylinder moved into a section of the cylinder that is not normally used, and the seals have maybe got a minute nick in them due to this., so when you press the pedal in the worn area, there is not a lot of pressure applied.
As for costs, the cylinder is around £110 which is a bit less than I thought it would be. Costs ontop of that for installing it though