I haven't heard anything about the powerflex exhaust mounts and would imagine that fitting them on the exhaust would be a bit of a pain as unlike the normal rubber ones they wouldn't allow you to be able to pull them over the hangers.
I know that C&R enterprises do OE style exhaust rubbers but they have a built in chain so in theory wont ever snap. I would stick with the rubber mounts as the powerflex ones might transmit a little more noise to the interior of the car.
Sounds like your gonna either have to get it up on stands or ideally on a ramp to check whats banging, The fitter may have fitted it so that it was close to the floor and as you say the new mounts have pulled it up.
Try loosening it all off and realigning it as this may solve your problem, if not then you may have to adapt the brackets you have so that you have an acceptable clearance between exhaust and floor.
Maybe pop it back to the place that fitted it saying its banging and see if they might sort it out as a good will gesture.