So on replacing the ignition coil for separate misfire issue, I can now no longer get the car to start because the immobiliser won't disengage...
I think it's the scorpion system that's the issue because it's either that or the starter motor, and that's been absolutely fine up to now. Also, the alarm itself has been iffy recently...going off overnight for no reason etc.
I've tried jumping it, bumping it, checked all the fuses and dont know what to do.
It's looking like i'll have to call an alarm specialist out to rip the damn thing out and install a new one.

Before I do that:
1) Has anyone had anything like this happen before?
2) Did a scorpion alarm come as standard with the 16v GTI? (i'm trying to work out whether it's aftermarket or not)
3) Any advice?
Thanks again all.