Which hoses did you take off?
Started with the bottom hose, then the top hose, then removed the hose on the right hand side of the cylinder head.
When I flushed through from the cylinder head side all of the water came through the top hose (Haynes said it would come out the bottom) so I guess that would mean that the thermostat was closed.
Not too worried as I have got a lot more antifreeze in the system than there was before. I'm guessing that the heater held on to a few litres.