Your floor is best welded from the underneath, and the plate must be welded all the way round, and not tacked (MOT regs)
Or, heres what I would do though.. make the 2 rust holes into 1 rectangular hole so that all the rust is gone, hold a steel plate underneath, and "scribe" through the top of the hole, cut your scribed plate to size, and carefully "butt weld" the plate into place.. lightly grind the underside to tidy the weld, clean off surrounding areas, and re underseal immeadiatly
Inside can be finished with a couple of light coats of grey primer.. dead neat, and NO water traps!
Tom