Right - I have a conclusion for those interested:
The Seat ECU was the problem.
Despite me hearing of various people who are running a VW engine on a Seat ECU or vice versa, It hasn't worked in mine.
I have now Fitted a VW ECU with a different Imob box, coil reader & key chip. I had a guy come out & code them for me & all the problems are gone. Only trouble is I will now have to pay to have the whole thing remapped to make the most of the mods I've added!

The issues this swap has solved were:
Overfuelling/ incorrect ignition timing from ECU? - 1) Exhaust hot to the tailpie within a minute or so. 2) Exhaust manifold glowing to near white after a 6mile journey below 40mph & 3k revs. 3) Very fuely smell from exhaust at idle.
No power - As mentioned before the car just had nothing to give. (Less than when it was an 8V!)
Trying to pinpoint a reason, the only things I can think are,
Was it to do with the TSR remapping on the Seat ECU? The cars both had high lift cams, full stainless exhausts with 4 branch manifolds, lightened flywheels etc so I would have thought it would suit.
Was it to do with the engine bay loom? ie if you fit a seat engine into a vw or vice versa & retain the Bay & Engine looms these match the ECU & all you would do is plug in the fuel rail, sensors etc. If its just the ecu which is changed then perhaps the pins are different which would not match the loom & maybe send signals down the wrong wires?

?
Anyway its done now but thought people might want an update.
Thanks to all those who contibuted ideas & any further nuggets of wisdom will be read with interest.
Ross.